Protein–RNA interactions for Protein: C9J069

C9orf172, Uncharacterized protein C9orf172, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf172C9J069 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
C9orf172C9J069 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C9orf172C9J069 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.9■□□□□ 0.94
C9orf172C9J069 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.9■□□□□ 0.94
C9orf172C9J069 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.9■□□□□ 0.94
C9orf172C9J069 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.9■□□□□ 0.94
C9orf172C9J069 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf172C9J069 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C9orf172C9J069 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
C9orf172C9J069 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
C9orf172C9J069 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
C9orf172C9J069 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
C9orf172C9J069 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf172C9J069 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
C9orf172C9J069 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf172C9J069 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.89■□□□□ 0.93
C9orf172C9J069 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.89■□□□□ 0.93
C9orf172C9J069 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.89■□□□□ 0.93
C9orf172C9J069 AC137761.2-201ENST00000561729 223 ntBASIC20.89■□□□□ 0.93
C9orf172C9J069 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.89■□□□□ 0.93
C9orf172C9J069 AC145350.3-201ENST00000569033 163 ntBASIC20.89■□□□□ 0.93
C9orf172C9J069 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
C9orf172C9J069 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf172C9J069 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C9orf172C9J069 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf172C9J069 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.88■□□□□ 0.93
C9orf172C9J069 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.88■□□□□ 0.93
C9orf172C9J069 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf172C9J069 AC016769.1-201ENST00000409132 1010 ntBASIC20.88■□□□□ 0.93
C9orf172C9J069 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf172C9J069 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf172C9J069 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.88■□□□□ 0.93
C9orf172C9J069 RAP2CP1-201ENST00000605103 478 ntBASIC20.88■□□□□ 0.93
C9orf172C9J069 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C9orf172C9J069 AP004607.4-201ENST00000530158 1459 ntBASIC20.88■□□□□ 0.93
C9orf172C9J069 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf172C9J069 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf172C9J069 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
C9orf172C9J069 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
C9orf172C9J069 AC004687.1-201ENST00000579003 1625 ntBASIC20.87■□□□□ 0.93
C9orf172C9J069 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.87■□□□□ 0.93
C9orf172C9J069 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.87■□□□□ 0.93
C9orf172C9J069 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf172C9J069 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.87■□□□□ 0.93
C9orf172C9J069 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.87■□□□□ 0.93
C9orf172C9J069 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
C9orf172C9J069 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf172C9J069 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C9orf172C9J069 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
C9orf172C9J069 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
C9orf172C9J069 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 CDCA4P2-201ENST00000441182 718 ntBASIC20.86■□□□□ 0.93
C9orf172C9J069 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.86■□□□□ 0.93
C9orf172C9J069 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.86■□□□□ 0.93
C9orf172C9J069 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C9orf172C9J069 BX005040.4-201ENST00000637145 1518 ntBASIC20.86■□□□□ 0.93
C9orf172C9J069 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 AC004854.2-201ENST00000608450 1441 ntBASIC20.86■□□□□ 0.93
C9orf172C9J069 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C9orf172C9J069 AC079630.1-202ENST00000618127 1840 ntBASIC20.85■□□□□ 0.93
C9orf172C9J069 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf172C9J069 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.85■□□□□ 0.93
C9orf172C9J069 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf172C9J069 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.85■□□□□ 0.93
C9orf172C9J069 AC073111.5-205ENST00000641717 521 ntBASIC20.85■□□□□ 0.93
C9orf172C9J069 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.85■□□□□ 0.93
C9orf172C9J069 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.85■□□□□ 0.93
C9orf172C9J069 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf172C9J069 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf172C9J069 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.85■□□□□ 0.93
C9orf172C9J069 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf172C9J069 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.84■□□□□ 0.93
C9orf172C9J069 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf172C9J069 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf172C9J069 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf172C9J069 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf172C9J069 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf172C9J069 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf172C9J069 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf172C9J069 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf172C9J069 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf172C9J069 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
C9orf172C9J069 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.83■□□□□ 0.93
C9orf172C9J069 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.83■□□□□ 0.93
C9orf172C9J069 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.83■□□□□ 0.93
C9orf172C9J069 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.83■□□□□ 0.93
C9orf172C9J069 AC068587.7-201ENST00000641602 218 ntBASIC20.83■□□□□ 0.93
C9orf172C9J069 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf172C9J069 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
C9orf172C9J069 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.83■□□□□ 0.92
C9orf172C9J069 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf172C9J069 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms