Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.32■□□□□ 0.84
HTR3EA5X5Y0 AC079630.1-202ENST00000618127 1840 ntBASIC20.32■□□□□ 0.84
HTR3EA5X5Y0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HTR3EA5X5Y0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HTR3EA5X5Y0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 AC021242.3-201ENST00000607598 1377 ntBASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.3■□□□□ 0.84
HTR3EA5X5Y0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 AC005703.6-201ENST00000623265 1329 ntBASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 BX664725.1-201ENST00000438252 379 ntBASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
HTR3EA5X5Y0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HTR3EA5X5Y0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 FP325331.1-202ENST00000623531 1380 ntBASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HTR3EA5X5Y0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTR3EA5X5Y0 AC144652.1-201ENST00000609974 1624 ntBASIC20.27■□□□□ 0.83
HTR3EA5X5Y0 KRT8P33-201ENST00000508125 1423 ntBASIC20.27■□□□□ 0.83
HTR3EA5X5Y0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.27■□□□□ 0.83
HTR3EA5X5Y0 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
HTR3EA5X5Y0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.26■□□□□ 0.83
HTR3EA5X5Y0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 AC127496.7-201ENST00000625110 1798 ntBASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HTR3EA5X5Y0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HTR3EA5X5Y0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms