Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 C1orf229-201ENST00000623686 2258 ntBASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CCDC196A0A1B0GTZ2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 AC136469.2-201ENST00000623944 1028 ntBASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC196A0A1B0GTZ2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 ESRRAP2-201ENST00000418437 1549 ntBASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC196A0A1B0GTZ2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 UNC93B3-201ENST00000308076 687 ntBASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC196A0A1B0GTZ2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.64■■□□□ 1.7
CCDC196A0A1B0GTZ2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC196A0A1B0GTZ2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.64■■□□□ 1.69
CCDC196A0A1B0GTZ2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
CCDC196A0A1B0GTZ2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC196A0A1B0GTZ2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC196A0A1B0GTZ2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC196A0A1B0GTZ2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 OR2I1P-207ENST00000453522 948 ntBASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 AC133561.1-201ENST00000568600 2415 ntBASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 LINC01960-201ENST00000563759 1884 ntBASIC25.62■■□□□ 1.69
CCDC196A0A1B0GTZ2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC196A0A1B0GTZ2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CCDC196A0A1B0GTZ2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.6■■□□□ 1.69
CCDC196A0A1B0GTZ2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms