Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV22A0A0B4J277 LINC01521-201ENST00000504184 1943 ntBASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV22A0A0B4J277 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV22A0A0B4J277 GCA-201ENST00000233612 1694 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 AC005559.1-201ENST00000589661 871 ntBASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV22A0A0B4J277 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRAV22A0A0B4J277 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 CAHM-201ENST00000604200 896 ntBASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TRAV22A0A0B4J277 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRAV22A0A0B4J277 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms