Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 AC004687.1-201ENST00000579003 1625 ntBASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 AF213884.3-201ENST00000563833 479 ntBASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 AC008764.7-201ENST00000593779 1081 ntBASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV25A0A0B4J276 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 DUSP8P5-201ENST00000422884 1815 ntBASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 SLC47A1P1-202ENST00000449666 945 ntBASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 AC087239.1-201ENST00000622671 572 ntBASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 AL136967.2-201ENST00000623968 743 ntBASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV25A0A0B4J276 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV25A0A0B4J276 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 AC099791.1-201ENST00000416440 715 ntBASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 AC126544.1-201ENST00000580842 1059 ntBASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV25A0A0B4J276 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 CA15P2-201ENST00000611168 834 ntBASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV25A0A0B4J276 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms