Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-6A0A0B4J262 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 YBX1P4-201ENST00000392794 808 ntBASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 AC010980.1-201ENST00000587192 1142 ntBASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-6A0A0B4J262 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-6A0A0B4J262 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-6A0A0B4J262 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 AC011551.1-201ENST00000614101 683 ntBASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-6A0A0B4J262 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRAV8-6A0A0B4J262 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 MIR6089-201ENST00000616698 64 ntBASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-6A0A0B4J262 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 AC007952.6-201ENST00000573168 2673 ntBASIC16.07■□□□□ 0.16
TRAV8-6A0A0B4J262 AC003957.1-201ENST00000625108 2673 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms