Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV2A0A0B4J234 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV2A0A0B4J234 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 AL136116.3-201ENST00000402907 1138 ntBASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV2A0A0B4J234 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 AC008406.3-201ENST00000620001 1374 ntBASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 SYT6-210ENST00000641643 1587 ntBASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV2A0A0B4J234 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 pRNA.6-201ENST00000610482 90 ntBASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 pRNA.5-201ENST00000612139 90 ntBASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 AC011298.3-201ENST00000615796 283 ntBASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 pRNA.11-201ENST00000618423 90 ntBASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 pRNA.13-201ENST00000619112 90 ntBASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAV2A0A0B4J234 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV2A0A0B4J234 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRAV2A0A0B4J234 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms