Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 AC127496.7-201ENST00000625110 1798 ntBASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC099791.2-201ENST00000605725 427 ntBASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC080038.3-201ENST00000623346 1952 ntBASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.53■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AL499627.2-201ENST00000606283 725 ntBASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.52■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 MIR4466-201ENST00000606121 54 ntBASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ECEL1P1-201ENST00000373592 1742 ntBASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.51■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC241377.3-202ENST00000626088 1088 ntBASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC241585.3-202ENST00000628937 1088 ntBASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 AC245100.8-202ENST00000629247 1058 ntBASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 LINC01960-201ENST00000563759 1884 ntBASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 LINC00526-201ENST00000581067 1875 ntBASIC19.5■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 pRNA.6-201ENST00000610482 90 ntBASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 pRNA.5-201ENST00000612139 90 ntBASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
IGKV1D-43A0A0B4J1Z2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms