Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV26-1A0A087WT03 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 AL136116.3-201ENST00000402907 1138 ntBASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 SRD5A1P1-201ENST00000442297 786 ntBASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 AL512631.2-201ENST00000604634 923 ntBASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV26-1A0A087WT03 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 MIR4466-201ENST00000606121 54 ntBASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV26-1A0A087WT03 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV26-1A0A087WT03 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 AL158211.5-201ENST00000623583 2518 ntBASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV26-1A0A087WT03 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV26-1A0A087WT03 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms