Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRAV9-1A0A075B6T8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV9-1A0A075B6T8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 MIR3960-201ENST00000583311 91 ntBASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-1A0A075B6T8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 AL022069.1-201ENST00000568025 1636 ntBASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.57■□□□□ 0.24
TRAV9-1A0A075B6T8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 ALDH1A3-203ENST00000557963 1670 ntBASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV9-1A0A075B6T8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.55■□□□□ 0.24
TRAV9-1A0A075B6T8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRAV9-1A0A075B6T8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV9-1A0A075B6T8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms