Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RPL17P11-201ENST00000417593 544 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AC108734.2-201ENST00000420887 1069 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 HNRNPA1P33-201ENST00000421426 561 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 RN7SL162P-201ENST00000579233 292 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 U62317.3-201ENST00000608319 855 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AP003419.4-201ENST00000616071 517 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PARPBPQ9NWS1 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 AK4-201ENST00000327299 6836 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
PARPBPQ9NWS1 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 BCAS2P2-201ENST00000425064 674 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 GCSHP3-201ENST00000431120 391 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RPE-208ENST00000436630 1128 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RPL29P2-202ENST00000498671 657 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 MIR5572-201ENST00000583188 137 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AC008972.2-201ENST00000606587 494 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AC011471.3-201ENST00000623576 402 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 AL451007.2-201ENST00000632004 563 ntBASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 PXK-210ENST00000479241 2817 ntTSL 2 BASIC11.95□□□□□ -0.5
PARPBPQ9NWS1 RBM22P2-201ENST00000393978 1814 ntBASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms