Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 CICP8-201ENST00000455800 2813 ntBASIC11.87□□□□□ -0.51
ZIC3O60481 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ZIC3O60481 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
ZIC3O60481 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.86□□□□□ -0.51
ZIC3O60481 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
ZIC3O60481 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ZIC3O60481 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 ZNF771-204ENST00000566625 2415 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 AF274858.1-201ENST00000406288 372 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC11.86□□□□□ -0.51
ZIC3O60481 AC005822.1-201ENST00000414124 1034 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 AL356000.1-201ENST00000441073 1238 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 AC027612.2-202ENST00000445955 1199 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 PSME2P2-201ENST00000453033 700 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 RN7SL789P-201ENST00000478944 293 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 SRP19-206ENST00000515463 660 ntTSL 3 BASIC11.86□□□□□ -0.51
ZIC3O60481 AC004801.1-201ENST00000549557 360 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC11.86□□□□□ -0.51
ZIC3O60481 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC11.86□□□□□ -0.51
ZIC3O60481 NAV1-210ENST00000593583 726 ntBASIC11.86□□□□□ -0.51
ZIC3O60481 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC11.86□□□□□ -0.51
ZIC3O60481 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ZIC3O60481 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.86□□□□□ -0.51
ZIC3O60481 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
ZIC3O60481 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC11.86□□□□□ -0.51
ZIC3O60481 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
ZIC3O60481 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.86□□□□□ -0.51
ZIC3O60481 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ZIC3O60481 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.85□□□□□ -0.51
ZIC3O60481 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC11.85□□□□□ -0.51
ZIC3O60481 AL121753.2-201ENST00000624581 1461 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 AC011239.2-201ENST00000624820 1489 ntBASIC11.85□□□□□ -0.51
ZIC3O60481 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ZIC3O60481 RNA5SP248-201ENST00000365602 127 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms