Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 ATAT1-204ENST00000330083 1728 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 SMN1-202ENST00000380707 1536 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 SMN2-203ENST00000380743 1536 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 AC079781.5-202ENST00000641784 3743 ntBASIC14.34□□□□□ -0.11
Q9Y3F1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Q9Y3F1 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q9Y3F1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
Q9Y3F1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Q9Y3F1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q9Y3F1 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q9Y3F1 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 MBL3P-201ENST00000402234 644 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 AC064836.1-201ENST00000405197 704 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 MTND6P7-201ENST00000433237 524 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC14.33□□□□□ -0.12
Q9Y3F1 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 RN7SL5P-201ENST00000581458 321 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 MIR4640-201ENST00000581824 90 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 RN7SL750P-201ENST00000582814 238 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 AC011472.2-201ENST00000586356 655 ntTSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 AC015911.7-201ENST00000587542 958 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 AC015912.3-201ENST00000619432 348 ntBASIC14.33□□□□□ -0.12
Q9Y3F1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.33□□□□□ -0.12
Q9Y3F1 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Q9Y3F1 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Q9Y3F1 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q9Y3F1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 CNMD-201ENST00000377962 1410 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 SEPT4-203ENST00000393086 1556 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 TPM3P7-201ENST00000338274 732 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 AL021407.3-201ENST00000407522 486 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 AL355493.1-201ENST00000422707 808 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC14.32□□□□□ -0.12
Q9Y3F1 RRM2P2-201ENST00000436212 652 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 C2orf27AP2-201ENST00000438438 555 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Q9Y3F1 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 RN7SL363P-201ENST00000482412 273 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 EEF1GP2-201ENST00000509352 1243 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 FOS-205ENST00000555242 629 ntTSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC14.32□□□□□ -0.12
Q9Y3F1 AC023509.4-201ENST00000602306 775 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 PRKN-210ENST00000612540 603 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q9Y3F1 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC14.32□□□□□ -0.12
Q9Y3F1 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC14.32□□□□□ -0.12
Q9Y3F1 GRK6P1-201ENST00000400595 1711 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 PES1P1-201ENST00000508165 1736 ntBASIC14.32□□□□□ -0.12
Q9Y3F1 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 204.5 ms