Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FAM86FP-202ENST00000427893 829 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 KLF17P1-201ENST00000547105 1126 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AL008721.1-201ENST00000609964 604 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AIFM1P1-201ENST00000413342 1841 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PPP1R26P1-201ENST00000474415 3613 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 GOLGA8UP-201ENST00000527159 1755 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 KRT17P5-201ENST00000332088 839 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 HNRNPA1P63-201ENST00000427917 963 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 RPS2P32-201ENST00000439199 892 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 GOLGA2P4-201ENST00000441462 777 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 KLK3-211ENST00000597483 810 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 ENPP4-201ENST00000321037 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 TUBB1P2-201ENST00000422712 1306 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 TUBB1P1-201ENST00000503144 1300 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 KRT8P21-201ENST00000430398 1491 ntBASIC10.8□□□□□ -0.68
RAB40CQ96S21 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
RAB40CQ96S21 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
RAB40CQ96S21 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms