Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 MGST3-204ENST00000367888 778 ntTSL 3 BASIC16.1■□□□□ 0.17
PDE6BP35913 GNRH2-203ENST00000380346 353 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 FTLP16-201ENST00000446400 513 ntBASIC16.1■□□□□ 0.17
PDE6BP35913 RN7SL483P-201ENST00000478417 285 ntBASIC16.1■□□□□ 0.17
PDE6BP35913 AC092745.1-201ENST00000535746 603 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 AC133539.1-201ENST00000562644 420 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC16.1■□□□□ 0.17
PDE6BP35913 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC16.1■□□□□ 0.17
PDE6BP35913 PSME3-213ENST00000592169 826 ntTSL 3 BASIC16.1■□□□□ 0.17
PDE6BP35913 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
PDE6BP35913 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 PDLIM1P1-201ENST00000604187 969 ntBASIC16.1■□□□□ 0.17
PDE6BP35913 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.1■□□□□ 0.17
PDE6BP35913 PPP1R26P2-201ENST00000611403 3595 ntBASIC16.1■□□□□ 0.17
PDE6BP35913 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PDE6BP35913 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC16.1■□□□□ 0.17
PDE6BP35913 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PDE6BP35913 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PDE6BP35913 HSD17B3-201ENST00000375262 984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 SOD1-202ENST00000389995 865 ntTSL 3 BASIC16.09■□□□□ 0.17
PDE6BP35913 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC16.09■□□□□ 0.17
PDE6BP35913 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 MTND6P7-201ENST00000433237 524 ntBASIC16.09■□□□□ 0.17
PDE6BP35913 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 CTSLP1-201ENST00000457530 1002 ntBASIC16.09■□□□□ 0.17
PDE6BP35913 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 AL160313.2-201ENST00000555875 493 ntTSL 3 BASIC16.09■□□□□ 0.17
PDE6BP35913 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC16.09■□□□□ 0.17
PDE6BP35913 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 MIR4459-201ENST00000581837 66 ntBASIC16.09■□□□□ 0.17
PDE6BP35913 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PDE6BP35913 UBA3-212ENST00000630585 390 ntTSL 4 BASIC16.09■□□□□ 0.17
PDE6BP35913 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 BIN3-212ENST00000640731 450 ntTSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 BARD1-214ENST00000620057 1456 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PDE6BP35913 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.09■□□□□ 0.17
PDE6BP35913 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PDE6BP35913 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDE6BP35913 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PDE6BP35913 RETREG3-203ENST00000585894 1733 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PDE6BP35913 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PDE6BP35913 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms