Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 AC091812.3-201ENST00000621362 345 ntBASIC12.6□□□□□ -0.39
SCN2BO60939 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SCN2BO60939 AL160287.1-203ENST00000637960 1061 ntBASIC12.6□□□□□ -0.39
SCN2BO60939 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC12.6□□□□□ -0.39
SCN2BO60939 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SCN2BO60939 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 ZWILCH-209ENST00000565627 1845 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SCN2BO60939 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC12.6□□□□□ -0.39
SCN2BO60939 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SCN2BO60939 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.59□□□□□ -0.39
SCN2BO60939 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SCN2BO60939 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 AK2-208ENST00000487289 920 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.59□□□□□ -0.39
SCN2BO60939 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC068867.1-201ENST00000559855 150 ntBASIC12.59□□□□□ -0.39
SCN2BO60939 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.59□□□□□ -0.39
SCN2BO60939 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC138894.2-201ENST00000602838 371 ntBASIC12.59□□□□□ -0.39
SCN2BO60939 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC051619.9-201ENST00000623237 597 ntBASIC12.59□□□□□ -0.39
SCN2BO60939 DUX4L33-201ENST00000635217 958 ntBASIC12.59□□□□□ -0.39
SCN2BO60939 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SCN2BO60939 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.59□□□□□ -0.39
SCN2BO60939 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SCN2BO60939 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SCN2BO60939 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
SCN2BO60939 FAM90A11P-201ENST00000518378 2218 ntBASIC12.58□□□□□ -0.39
SCN2BO60939 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC12.58□□□□□ -0.39
SCN2BO60939 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SCN2BO60939 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.58□□□□□ -0.4
SCN2BO60939 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SCN2BO60939 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SCN2BO60939 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms