Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SATB2Q9UPW6 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SATB2Q9UPW6 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
SATB2Q9UPW6 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 ABCD1P2-201ENST00000429313 1601 ntBASIC13.14□□□□□ -0.31
SATB2Q9UPW6 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 AL137244.1-201ENST00000422931 865 ntBASIC13.14□□□□□ -0.31
SATB2Q9UPW6 EEF1DP5-201ENST00000431410 772 ntBASIC13.14□□□□□ -0.31
SATB2Q9UPW6 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 MED11-202ENST00000573708 802 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 RYR1-202ENST00000359596 15117 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SATB2Q9UPW6 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PER1-211ENST00000581082 4521 ntTSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC008536.3-201ENST00000623282 1599 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC092810.2-201ENST00000431570 362 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC005722.1-201ENST00000431878 964 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC120498.7-201ENST00000562876 330 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 FAM187B2P-201ENST00000577135 713 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.13□□□□□ -0.31
SATB2Q9UPW6 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.13□□□□□ -0.31
SATB2Q9UPW6 AC135782.3-201ENST00000562782 2105 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms