Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 RIPPLY1-202ENST00000411805 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 AC234582.1-206ENST00000430312 845 ntTSL 5 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 RPL5P1-201ENST00000460716 894 ntBASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 TRIT1-215ENST00000541099 545 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 GRXCR2-202ENST00000639411 837 ntTSL 5 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 IQCD-202ENST00000416617 1673 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 BHLHB9P1-201ENST00000553845 1651 ntBASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RIMBP3Q9UFD9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 TPRKB-201ENST00000272424 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 GSTM1-202ENST00000349334 1028 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 GSTM5-202ENST00000369812 657 ntTSL 5 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 AL513475.2-201ENST00000402316 392 ntBASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 KRT18P12-201ENST00000425245 1273 ntBASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 RN7SL380P-201ENST00000461702 308 ntBASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 AC093152.1-201ENST00000495684 564 ntTSL 5 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 IGKV2-10-201ENST00000518834 351 ntBASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 NAV2-AS4-201ENST00000532874 1181 ntTSL 5 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 AC020978.3-202ENST00000563175 457 ntTSL 3 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 AC060764.1-201ENST00000603811 454 ntBASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 AC093323.2-201ENST00000632154 976 ntBASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 COX6B2-209ENST00000590900 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RIMBP3Q9UFD9 PI3-201ENST00000243924 577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 HSD17B3-202ENST00000375263 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 ASS1P7-201ENST00000423174 1226 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 OR7E110P-201ENST00000431186 574 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AP000522.1-201ENST00000448070 121 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 RPSAP69-202ENST00000456555 883 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 RN7SL782P-201ENST00000476421 294 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AC136628.2-201ENST00000505650 1142 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 C17orf62-215ENST00000578913 563 ntTSL 2 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 RN7SL811P-201ENST00000580735 298 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AC011467.6-201ENST00000603174 320 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AC013403.2-201ENST00000607659 480 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AC006547.1-201ENST00000628442 550 ntTSL 5 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 GPR101-201ENST00000298110 1527 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 RBM4-206ENST00000483858 1548 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 TTC8-201ENST00000338104 2226 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 DDC-214ENST00000622873 1839 ntTSL 3 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 SELENOK-204ENST00000495461 1633 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 FP885919.1-201ENST00000331259 1038 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 THRB-AS1-201ENST00000432368 1216 ntTSL 2 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AC006987.2-201ENST00000434709 527 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 OR52P1P-201ENST00000438474 963 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 FTH1-203ENST00000529191 530 ntTSL 2 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 OR4D7P-201ENST00000534196 942 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 ZNF213-AS1-202ENST00000571449 919 ntTSL 3 BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AL031587.4-201ENST00000609265 691 ntBASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 SMAD3-204ENST00000540846 1567 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RIMBP3Q9UFD9 AL365181.3-201ENST00000605886 3222 ntBASIC19.64■□□□□ 0.74
RIMBP3Q9UFD9 RFC4-201ENST00000296273 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms