Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 ASS1P2-201ENST00000439895 1223 ntBASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC015818.1-201ENST00000451011 244 ntBASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AREG-202ENST00000502307 956 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 KRT18P37-201ENST00000520711 1282 ntBASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 TRMT112P3-201ENST00000580149 358 ntBASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 MIR6746-201ENST00000620971 63 ntBASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 RETN-203ENST00000629642 400 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AC134407.3-201ENST00000624035 2139 ntBASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
PARPBPQ9NWS1 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 LINC00567-201ENST00000569854 3409 ntBASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 KRT18P4-201ENST00000422599 1288 ntBASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC090136.2-201ENST00000517809 420 ntBASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 C2orf69P1-201ENST00000563532 1093 ntBASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
PARPBPQ9NWS1 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms