Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AL606760.3-201ENST00000569869 3591 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 NME1-NME2-201ENST00000376392 894 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 FXNP2-201ENST00000411625 547 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AQP7P5-201ENST00000428759 1049 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AQP7P4-201ENST00000447083 1042 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AL049597.1-201ENST00000447415 555 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AQP7P2-201ENST00000453967 1041 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 RN7SL396P-201ENST00000471086 295 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 RN7SL818P-201ENST00000485099 259 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 TLE2-205ENST00000586422 389 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 RN7SL725P-201ENST00000606439 259 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AC006483.2-201ENST00000609813 515 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AQP7P3-201ENST00000624547 1041 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AC005549.1-201ENST00000579438 1629 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AL121753.2-201ENST00000624581 1461 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 AC092978.1-202ENST00000637590 1327 ntBASIC14.1□□□□□ -0.15
LMO3Q8TAP4 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LMO3Q8TAP4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AC110048.1-201ENST00000604293 2157 ntBASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PER1-202ENST00000354903 3115 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AL365259.1-204ENST00000606001 2635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AL135901.1-201ENST00000451812 333 ntBASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 ALG1L3P-201ENST00000503331 765 ntBASIC14.09□□□□□ -0.15
LMO3Q8TAP4 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.09□□□□□ -0.15
LMO3Q8TAP4 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
LMO3Q8TAP4 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LMO3Q8TAP4 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LMO3Q8TAP4 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms