Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AL606760.3-201ENST00000569869 3591 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AMBRA1-212ENST00000534300 5067 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC134682.1-201ENST00000569285 3377 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 IQSEC3P1-201ENST00000538799 536 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC023310.1-201ENST00000554836 735 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC005730.2-201ENST00000564549 1184 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 AL031673.1-201ENST00000611460 466 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 ATF4P4-201ENST00000393544 1930 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 C1S-221ENST00000617865 2844 ntTSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PES1-203ENST00000402281 2760 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PKM-222ENST00000568883 1863 ntTSL 5 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 KRT8P18-201ENST00000413425 1445 ntBASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 LRRC8E-206ENST00000618098 3743 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
RCL1Q9Y2P8 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AC090502.4-201ENST00000551714 1386 ntBASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RNA5SP359-201ENST00000364838 113 ntBASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 GGTLC4P-201ENST00000402176 664 ntBASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AC026954.1-201ENST00000429771 1293 ntBASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RNMTL1P1-201ENST00000454103 560 ntBASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AC021723.1-201ENST00000486306 515 ntBASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RCL1Q9Y2P8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms