Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC026992.2-203ENST00000563004 2419 ntBASIC12.63□□□□□ -0.39
CLK1P49759 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.63□□□□□ -0.39
CLK1P49759 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 FMO6P-201ENST00000236166 1620 ntBASIC12.63□□□□□ -0.39
CLK1P49759 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.63□□□□□ -0.39
CLK1P49759 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 AL592076.1-201ENST00000424448 303 ntBASIC12.63□□□□□ -0.39
CLK1P49759 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.63□□□□□ -0.39
CLK1P49759 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 RPL18AP8-201ENST00000486071 528 ntBASIC12.63□□□□□ -0.39
CLK1P49759 RN7SL67P-201ENST00000492147 296 ntBASIC12.63□□□□□ -0.39
CLK1P49759 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 RTN3P1-201ENST00000536295 711 ntBASIC12.63□□□□□ -0.39
CLK1P49759 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 AC091812.3-201ENST00000621362 345 ntBASIC12.63□□□□□ -0.39
CLK1P49759 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 AF013593.1-201ENST00000458074 1487 ntBASIC12.63□□□□□ -0.39
CLK1P49759 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 AC093462.1-201ENST00000621167 1683 ntBASIC12.63□□□□□ -0.39
CLK1P49759 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.63□□□□□ -0.39
CLK1P49759 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 C8orf17-202ENST00000625034 2775 ntBASIC12.63□□□□□ -0.39
CLK1P49759 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CLK1P49759 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC12.63□□□□□ -0.39
CLK1P49759 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CLK1P49759 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CLK1P49759 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 TBC1D27-202ENST00000424239 1573 ntBASIC12.62□□□□□ -0.39
CLK1P49759 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CLK1P49759 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CLK1P49759 AL583805.1-201ENST00000391389 531 ntBASIC12.62□□□□□ -0.39
CLK1P49759 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.62□□□□□ -0.39
CLK1P49759 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms