Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
MTHFRP42898 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC13.89□□□□□ -0.19
MTHFRP42898 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 RN7SL677P-201ENST00000466970 319 ntBASIC13.89□□□□□ -0.19
MTHFRP42898 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC13.89□□□□□ -0.19
MTHFRP42898 DDX11L8-201ENST00000535849 366 ntBASIC13.89□□□□□ -0.19
MTHFRP42898 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC13.89□□□□□ -0.19
MTHFRP42898 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 RN7SL202P-201ENST00000584410 262 ntBASIC13.89□□□□□ -0.19
MTHFRP42898 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
MTHFRP42898 Z82244.1-201ENST00000631502 840 ntBASIC13.89□□□□□ -0.19
MTHFRP42898 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.89□□□□□ -0.19
MTHFRP42898 AC002350.2-201ENST00000623894 1828 ntBASIC13.89□□□□□ -0.19
MTHFRP42898 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.89□□□□□ -0.19
MTHFRP42898 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
MTHFRP42898 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
MTHFRP42898 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
MTHFRP42898 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MTHFRP42898 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.88□□□□□ -0.19
MTHFRP42898 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC13.88□□□□□ -0.19
MTHFRP42898 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC13.88□□□□□ -0.19
MTHFRP42898 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MTHFRP42898 PGAM1P10-201ENST00000402426 761 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 HMGN1P4-201ENST00000419500 290 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 HLA-DQB3-203ENST00000425319 356 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC13.88□□□□□ -0.19
MTHFRP42898 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC13.88□□□□□ -0.19
MTHFRP42898 AK2-208ENST00000487289 920 ntTSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 GOLGA2P10-201ENST00000550961 817 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.88□□□□□ -0.19
MTHFRP42898 IGHV1OR16-3-201ENST00000568138 205 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC13.88□□□□□ -0.19
MTHFRP42898 AC131274.3-201ENST00000578745 1271 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 AC136475.9-201ENST00000605240 497 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 AC006273.1-201ENST00000606966 861 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 MIR6893-201ENST00000613458 69 ntBASIC13.88□□□□□ -0.19
MTHFRP42898 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC13.88□□□□□ -0.19
MTHFRP42898 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.88□□□□□ -0.19
MTHFRP42898 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
MTHFRP42898 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MTHFRP42898 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.88□□□□□ -0.19
MTHFRP42898 SRL-202ENST00000537996 1814 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 AC019294.4-201ENST00000561777 2905 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
MTHFRP42898 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC13.87□□□□□ -0.19
MTHFRP42898 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 AL157832.2-205ENST00000597245 1649 ntBASIC13.87□□□□□ -0.19
MTHFRP42898 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
MTHFRP42898 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
MTHFRP42898 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms