Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 AC012146.4-201ENST00000575546 271 ntBASIC14.34□□□□□ -0.11
PPP3CAQ08209 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.34□□□□□ -0.11
PPP3CAQ08209 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 KF455155.1-201ENST00000604493 303 ntBASIC14.34□□□□□ -0.11
PPP3CAQ08209 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PPP3CAQ08209 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PPP3CAQ08209 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
PPP3CAQ08209 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 PCDHB17P-202ENST00000623466 3066 ntBASIC14.34□□□□□ -0.11
PPP3CAQ08209 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PPP3CAQ08209 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.34□□□□□ -0.11
PPP3CAQ08209 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PPP3CAQ08209 AC027369.3-201ENST00000530465 3707 ntBASIC14.33□□□□□ -0.11
PPP3CAQ08209 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP3CAQ08209 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP3CAQ08209 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PPP3CAQ08209 AC118758.2-201ENST00000614242 2813 ntBASIC14.33□□□□□ -0.11
PPP3CAQ08209 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
PPP3CAQ08209 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP3CAQ08209 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
PPP3CAQ08209 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC14.33□□□□□ -0.11
PPP3CAQ08209 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PPP3CAQ08209 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PPP3CAQ08209 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 MIR324-201ENST00000362183 83 ntBASIC14.33□□□□□ -0.12
PPP3CAQ08209 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 RPL35P1-201ENST00000450819 370 ntBASIC14.33□□□□□ -0.12
PPP3CAQ08209 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 ALG1L7P-201ENST00000502317 768 ntBASIC14.33□□□□□ -0.12
PPP3CAQ08209 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 AC005274.1-201ENST00000623460 802 ntBASIC14.33□□□□□ -0.12
PPP3CAQ08209 LINC00431-202ENST00000636375 159 ntBASIC14.33□□□□□ -0.12
PPP3CAQ08209 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PPP3CAQ08209 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC14.33□□□□□ -0.12
PPP3CAQ08209 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
PPP3CAQ08209 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC14.32□□□□□ -0.12
PPP3CAQ08209 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PPP3CAQ08209 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.32□□□□□ -0.12
PPP3CAQ08209 AL672207.1-201ENST00000328462 1570 ntBASIC14.32□□□□□ -0.12
PPP3CAQ08209 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PPP3CAQ08209 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC14.32□□□□□ -0.12
PPP3CAQ08209 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms