Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.01□□□□□ -0.01
TPM3P06753 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.01□□□□□ -0.01
TPM3P06753 AC007663.3-201ENST00000609632 465 ntBASIC15.01□□□□□ -0.01
TPM3P06753 AC022748.3-201ENST00000621828 275 ntBASIC15.01□□□□□ -0.01
TPM3P06753 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC15.01□□□□□ -0.01
TPM3P06753 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 ARHGAP36-202ENST00000370921 2447 ntTSL 2 BASIC15.01□□□□□ -0.01
TPM3P06753 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TPM3P06753 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15□□□□□ -0.01
TPM3P06753 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC15□□□□□ -0.01
TPM3P06753 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
TPM3P06753 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
TPM3P06753 ATF4P4-201ENST00000393544 1930 ntBASIC15□□□□□ -0.01
TPM3P06753 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC15□□□□□ -0.01
TPM3P06753 DGKZP1-201ENST00000378718 2776 ntBASIC15□□□□□ -0.01
TPM3P06753 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 AC145098.2-201ENST00000623593 3026 ntBASIC15□□□□□ -0.01
TPM3P06753 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 AGER-203ENST00000375065 665 ntTSL 2 BASIC15□□□□□ -0.01
TPM3P06753 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 MIR663B-201ENST00000408361 115 ntBASIC15□□□□□ -0.01
TPM3P06753 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15□□□□□ -0.01
TPM3P06753 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC15□□□□□ -0.01
TPM3P06753 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15□□□□□ -0.01
TPM3P06753 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15□□□□□ -0.01
TPM3P06753 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15□□□□□ -0.01
TPM3P06753 AL137779.3-201ENST00000553295 729 ntBASIC15□□□□□ -0.01
TPM3P06753 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15□□□□□ -0.01
TPM3P06753 AC090971.1-201ENST00000559302 510 ntTSL 2 BASIC15□□□□□ -0.01
TPM3P06753 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15□□□□□ -0.01
TPM3P06753 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15□□□□□ -0.01
TPM3P06753 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC15□□□□□ -0.01
TPM3P06753 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TPM3P06753 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 KRT8P21-201ENST00000430398 1491 ntBASIC15□□□□□ -0.01
TPM3P06753 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
TPM3P06753 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TPM3P06753 LINC01561-201ENST00000369071 2176 ntBASIC15□□□□□ -0.01
TPM3P06753 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.99□□□□□ -0.01
TPM3P06753 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TPM3P06753 LINC00303-201ENST00000367207 1891 ntTSL 2 BASIC14.99□□□□□ -0.01
TPM3P06753 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.99□□□□□ -0.01
TPM3P06753 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TPM3P06753 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TPM3P06753 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 PER1-211ENST00000581082 4521 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 NME2P1-201ENST00000426182 414 ntBASIC14.99□□□□□ -0.01
TPM3P06753 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.99□□□□□ -0.01
TPM3P06753 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 AC104073.2-201ENST00000453737 312 ntBASIC14.99□□□□□ -0.01
TPM3P06753 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.99□□□□□ -0.01
TPM3P06753 RCC2P8-201ENST00000502779 1035 ntBASIC14.99□□□□□ -0.01
TPM3P06753 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.99□□□□□ -0.01
TPM3P06753 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.99□□□□□ -0.01
TPM3P06753 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.99□□□□□ -0.01
TPM3P06753 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TPM3P06753 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms