Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SCN2BO60939 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC12.67□□□□□ -0.38
SCN2BO60939 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
SCN2BO60939 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
SCN2BO60939 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.66□□□□□ -0.38
SCN2BO60939 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.66□□□□□ -0.38
SCN2BO60939 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 RN7SL375P-201ENST00000492442 298 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 RN7SL81P-201ENST00000493781 261 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 EEF1GP8-201ENST00000506566 1154 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 AC100858.1-201ENST00000514059 1228 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.66□□□□□ -0.38
SCN2BO60939 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC12.66□□□□□ -0.38
SCN2BO60939 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC12.66□□□□□ -0.38
SCN2BO60939 C2orf27AP1-201ENST00000618128 586 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 AC138627.1-207ENST00000641560 1006 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 FAM90A17P-201ENST00000533716 1957 ntBASIC12.66□□□□□ -0.38
SCN2BO60939 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SCN2BO60939 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SCN2BO60939 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCN2BO60939 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.66□□□□□ -0.38
SCN2BO60939 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC12.65□□□□□ -0.38
SCN2BO60939 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 ZDHHC8P1-202ENST00000418264 1403 ntBASIC12.65□□□□□ -0.38
SCN2BO60939 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 Z98259.1-201ENST00000564261 1697 ntBASIC12.65□□□□□ -0.38
SCN2BO60939 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.65□□□□□ -0.38
SCN2BO60939 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.65□□□□□ -0.38
SCN2BO60939 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 AL592076.1-201ENST00000424448 303 ntBASIC12.65□□□□□ -0.38
SCN2BO60939 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.65□□□□□ -0.38
SCN2BO60939 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.65□□□□□ -0.38
SCN2BO60939 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.65□□□□□ -0.38
SCN2BO60939 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCN2BO60939 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SCN2BO60939 AC084781.1-201ENST00000613737 656 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms