Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 HILS1-202ENST00000545329 423 ntBASIC13.09□□□□□ -0.31
RNF217Q8TC41 AL512310.5-201ENST00000551999 515 ntBASIC13.09□□□□□ -0.31
RNF217Q8TC41 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 TMF1P1-201ENST00000576058 373 ntBASIC13.09□□□□□ -0.31
RNF217Q8TC41 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 MIR6752-201ENST00000618442 71 ntBASIC13.09□□□□□ -0.31
RNF217Q8TC41 AC133540.1-201ENST00000620845 1019 ntBASIC13.09□□□□□ -0.31
RNF217Q8TC41 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 TMEFF2-202ENST00000392314 2842 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 CBLB-203ENST00000403724 3350 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF217Q8TC41 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF217Q8TC41 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC13.08□□□□□ -0.31
RNF217Q8TC41 TWNK-201ENST00000311916 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF217Q8TC41 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF217Q8TC41 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.08□□□□□ -0.31
RNF217Q8TC41 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.08□□□□□ -0.31
RNF217Q8TC41 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SMIM26-201ENST00000411646 505 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 RPS6P14-201ENST00000425165 719 ntBASIC13.08□□□□□ -0.32
RNF217Q8TC41 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 IGHV3-71-201ENST00000523324 359 ntBASIC13.08□□□□□ -0.32
RNF217Q8TC41 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AC009542.2-202ENST00000619004 1067 ntBASIC13.08□□□□□ -0.32
RNF217Q8TC41 AL162426.1-201ENST00000624141 743 ntBASIC13.08□□□□□ -0.32
RNF217Q8TC41 Z98259.2-201ENST00000641583 609 ntBASIC13.08□□□□□ -0.32
RNF217Q8TC41 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RNF217Q8TC41 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.08□□□□□ -0.32
RNF217Q8TC41 AC115284.2-201ENST00000624646 2054 ntBASIC13.08□□□□□ -0.32
RNF217Q8TC41 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF217Q8TC41 GAPDHP72-202ENST00000636791 2141 ntTSL 5 BASIC13.07□□□□□ -0.32
RNF217Q8TC41 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
RNF217Q8TC41 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF217Q8TC41 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.07□□□□□ -0.32
RNF217Q8TC41 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.07□□□□□ -0.32
RNF217Q8TC41 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms