Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 CALR4P-201ENST00000431943 946 ntBASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 GRPEL2P1-201ENST00000453145 339 ntBASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 PIGCP1-201ENST00000527583 895 ntBASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 AL353770.1-201ENST00000614915 403 ntBASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC12.21□□□□□ -0.45
CLDN22Q8N7P3 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 POM121L7P-201ENST00000329949 2404 ntBASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 JAML-211ENST00000533261 1508 ntTSL 5 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
CLDN22Q8N7P3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AL162615.1-201ENST00000429893 1653 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 PYY2-201ENST00000315776 282 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 STK24P1-201ENST00000455035 1291 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 MIR3619-201ENST00000579667 83 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 MIR6787-201ENST00000616675 61 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AC091769.1-201ENST00000619576 568 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 AC009560.1-201ENST00000620208 434 ntBASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CLDN22Q8N7P3 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms