Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 AC018445.4-201ENST00000624066 2291 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 AIFM1P1-201ENST00000413342 1841 ntBASIC13.48□□□□□ -0.25
KDELR3O43731 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KDELR3O43731 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KDELR3O43731 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KDELR3O43731 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.47□□□□□ -0.25
KDELR3O43731 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.47□□□□□ -0.25
KDELR3O43731 GAPDHP29-201ENST00000429913 985 ntBASIC13.47□□□□□ -0.25
KDELR3O43731 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.47□□□□□ -0.25
KDELR3O43731 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.47□□□□□ -0.25
KDELR3O43731 AC123912.6-201ENST00000612657 315 ntBASIC13.47□□□□□ -0.25
KDELR3O43731 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
KDELR3O43731 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.47□□□□□ -0.25
KDELR3O43731 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KDELR3O43731 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
KDELR3O43731 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KDELR3O43731 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC13.47□□□□□ -0.25
KDELR3O43731 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 AC020931.1-201ENST00000589622 1346 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 CCND3P1-201ENST00000438347 580 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
KDELR3O43731 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 KNOP1P1-201ENST00000542108 989 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 ACTBP9-201ENST00000587663 1099 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.46□□□□□ -0.25
KDELR3O43731 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.46□□□□□ -0.25
KDELR3O43731 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 BX322534.1-201ENST00000635574 241 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 AC215524.1-201ENST00000635696 241 ntBASIC13.46□□□□□ -0.25
KDELR3O43731 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
KDELR3O43731 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KDELR3O43731 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
KDELR3O43731 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms