Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC16.89■□□□□ 0.29
CHL1O00533 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.89■□□□□ 0.29
CHL1O00533 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC16.89■□□□□ 0.29
CHL1O00533 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHL1O00533 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHL1O00533 SLC25A6P1-201ENST00000412123 775 ntBASIC16.89■□□□□ 0.29
CHL1O00533 DPY19L2P4-201ENST00000479881 442 ntBASIC16.89■□□□□ 0.29
CHL1O00533 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.89■□□□□ 0.29
CHL1O00533 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC16.89■□□□□ 0.29
CHL1O00533 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 SNX20-205ENST00000610485 557 ntTSL 5 BASIC16.89■□□□□ 0.29
CHL1O00533 AC245369.7-201ENST00000631386 350 ntBASIC16.89■□□□□ 0.29
CHL1O00533 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.89■□□□□ 0.29
CHL1O00533 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.89■□□□□ 0.29
CHL1O00533 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.89■□□□□ 0.29
CHL1O00533 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CHL1O00533 CASC4P1-201ENST00000456608 1312 ntBASIC16.89■□□□□ 0.29
CHL1O00533 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.89■□□□□ 0.29
CHL1O00533 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 AOC4P-203ENST00000566825 2289 ntBASIC16.89■□□□□ 0.29
CHL1O00533 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.89■□□□□ 0.29
CHL1O00533 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHL1O00533 DDX11L2-201ENST00000437401 1398 ntBASIC16.89■□□□□ 0.29
CHL1O00533 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.89■□□□□ 0.29
CHL1O00533 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 AL031719.1-201ENST00000623365 2587 ntBASIC16.88■□□□□ 0.29
CHL1O00533 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 AC120114.4-201ENST00000623731 2194 ntBASIC16.88■□□□□ 0.29
CHL1O00533 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 AC067852.6-201ENST00000591237 1736 ntBASIC16.88■□□□□ 0.29
CHL1O00533 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC16.88■□□□□ 0.29
CHL1O00533 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CHL1O00533 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 SNORA57-201ENST00000383870 149 ntBASIC16.88■□□□□ 0.29
CHL1O00533 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC16.88■□□□□ 0.29
CHL1O00533 YY1P2-201ENST00000438766 948 ntBASIC16.88■□□□□ 0.29
CHL1O00533 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.88■□□□□ 0.29
CHL1O00533 TREX1-203ENST00000456089 629 ntTSL 3 BASIC16.88■□□□□ 0.29
CHL1O00533 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC16.88■□□□□ 0.29
CHL1O00533 AC104115.1-201ENST00000484005 623 ntBASIC16.88■□□□□ 0.29
CHL1O00533 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC16.88■□□□□ 0.29
CHL1O00533 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC16.88■□□□□ 0.29
CHL1O00533 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CHL1O00533 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CHL1O00533 AC018846.1-201ENST00000568231 183 ntBASIC16.88■□□□□ 0.29
CHL1O00533 MIR4254-201ENST00000581063 76 ntBASIC16.88■□□□□ 0.29
CHL1O00533 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC16.88■□□□□ 0.29
CHL1O00533 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC16.88■□□□□ 0.29
CHL1O00533 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 AL627230.2-201ENST00000613254 655 ntBASIC16.88■□□□□ 0.29
CHL1O00533 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.88■□□□□ 0.29
CHL1O00533 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC16.88■□□□□ 0.29
CHL1O00533 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHL1O00533 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 AC010182.1-201ENST00000548943 2434 ntBASIC16.88■□□□□ 0.29
CHL1O00533 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
CHL1O00533 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC16.88■□□□□ 0.29
CHL1O00533 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHL1O00533 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC16.87■□□□□ 0.29
CHL1O00533 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC16.87■□□□□ 0.29
CHL1O00533 AC091181.1-201ENST00000623762 2098 ntBASIC16.87■□□□□ 0.29
CHL1O00533 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHL1O00533 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.87■□□□□ 0.29
CHL1O00533 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 CDKN2A-AS1-201ENST00000441769 823 ntBASIC16.87■□□□□ 0.29
CHL1O00533 YBX1P3-201ENST00000468366 909 ntBASIC16.87■□□□□ 0.29
CHL1O00533 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.87■□□□□ 0.29
CHL1O00533 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHL1O00533 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms