Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 AC060814.4-201ENST00000594169 2163 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC073862.5-201ENST00000624129 2027 ntBASIC9.92□□□□□ -0.82
NACAE9PAV3 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC9.92□□□□□ -0.82
NACAE9PAV3 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC9.92□□□□□ -0.82
NACAE9PAV3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
NACAE9PAV3 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC9.91□□□□□ -0.82
NACAE9PAV3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 ASCC3-204ENST00000369162 8146 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 FAM90A2P-201ENST00000511144 1395 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 FAM90A25P-201ENST00000528404 1395 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC012531.1-201ENST00000562848 2680 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 MAPK10-262ENST00000641051 5738 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 BX537318.2-201ENST00000624893 4162 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 FGFR2-212ENST00000369060 3244 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC078991.1-201ENST00000437297 610 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 RN7SL81P-201ENST00000493781 261 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 POU5F1P2-201ENST00000521750 823 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 CD44-224ENST00000526669 870 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC9.91□□□□□ -0.82
NACAE9PAV3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 NPM1P43-201ENST00000558669 786 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC9.91□□□□□ -0.82
NACAE9PAV3 RN7SL555P-201ENST00000584742 339 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC9.91□□□□□ -0.82
NACAE9PAV3 U62317.3-201ENST00000608319 855 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AF013593.1-201ENST00000458074 1487 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 PCDHB17P-202ENST00000623466 3066 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AL021155.1-201ENST00000438808 2637 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 PRRC2B-202ENST00000357304 11042 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC9.91□□□□□ -0.82
NACAE9PAV3 MBP-201ENST00000354542 575 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC9.91□□□□□ -0.82
NACAE9PAV3 RPSAP31-201ENST00000416648 895 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC104784.1-201ENST00000473096 294 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC9.91□□□□□ -0.82
NACAE9PAV3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC9.91□□□□□ -0.82
NACAE9PAV3 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC9.91□□□□□ -0.82
NACAE9PAV3 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC9.91□□□□□ -0.82
NACAE9PAV3 RN7SL736P-201ENST00000613111 269 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 CR392039.2-201ENST00000623182 509 ntBASIC9.91□□□□□ -0.82
NACAE9PAV3 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC9.91□□□□□ -0.82
NACAE9PAV3 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
NACAE9PAV3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
NACAE9PAV3 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms