Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 RN7SL720P-201ENST00000488178 304 ntBASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 MIR4265-201ENST00000582152 99 ntBASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 Z82244.1-201ENST00000631502 840 ntBASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 CICP18-201ENST00000406017 2812 ntBASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
AMBRA1Q9C0C7 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 RPL3P2-204ENST00000413027 1203 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 RPSAP15-201ENST00000448168 861 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AC145285.5-201ENST00000562217 361 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AC132812.1-201ENST00000583145 892 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 MIR4687-201ENST00000583618 80 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AL591926.3-201ENST00000611630 238 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 MIR6769A-201ENST00000617340 73 ntBASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
AMBRA1Q9C0C7 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms