Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 MKRN7P-201ENST00000433469 1371 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 MPV17-209ENST00000405983 859 ntTSL 5 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 AC093909.3-201ENST00000504783 336 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 AP003419.4-201ENST00000616071 517 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 AOC4P-203ENST00000566825 2289 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 PSMC4-201ENST00000157812 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 FAM183BP-201ENST00000409072 1595 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PPP3CAQ08209 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
PPP3CAQ08209 AL606760.3-201ENST00000569869 3591 ntBASIC14.37□□□□□ -0.11
PPP3CAQ08209 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 KRT8P38-201ENST00000441370 1430 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 SNORA50D-201ENST00000408059 134 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 OR7E155P-201ENST00000412208 1014 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 SDCBP2P1-201ENST00000416115 614 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 KRT18P4-201ENST00000422599 1288 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 ASS1P2-201ENST00000439895 1223 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 PIN4P1-201ENST00000451079 396 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 VTI1BP1-201ENST00000486325 700 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 MIR5196-201ENST00000578146 115 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC011471.3-201ENST00000623576 402 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 SNORA50D-202ENST00000627561 132 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 AL451007.2-201ENST00000632004 563 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 AL139823.1-201ENST00000641871 1225 ntBASIC14.36□□□□□ -0.11
PPP3CAQ08209 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PPP3CAQ08209 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.36□□□□□ -0.11
PPP3CAQ08209 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.35□□□□□ -0.11
PPP3CAQ08209 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms