Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
MTHFRP42898 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MTHFRP42898 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC13.96□□□□□ -0.17
MTHFRP42898 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 AC073548.1-201ENST00000624088 1882 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 SNORA30.1-201ENST00000363193 129 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 OR7E122P-201ENST00000383606 1017 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 TUBB8P9-201ENST00000422534 1276 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 TUBB8P10-201ENST00000430210 1279 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 PTPA-219ENST00000435305 530 ntTSL 2 BASIC13.96□□□□□ -0.17
MTHFRP42898 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
MTHFRP42898 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 BICD1P1-201ENST00000457832 1222 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 RN7SL452P-201ENST00000482923 291 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 RN7SL646P-201ENST00000492969 297 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 AC103724.2-201ENST00000520355 476 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 IGHVII-33-1-201ENST00000524010 280 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC13.96□□□□□ -0.17
MTHFRP42898 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC13.96□□□□□ -0.17
MTHFRP42898 AC211476.2-201ENST00000608799 708 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 AC134878.2-201ENST00000620700 1265 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC13.96□□□□□ -0.17
MTHFRP42898 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC13.96□□□□□ -0.17
MTHFRP42898 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.96□□□□□ -0.17
MTHFRP42898 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MTHFRP42898 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MTHFRP42898 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MTHFRP42898 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MTHFRP42898 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.96□□□□□ -0.18
MTHFRP42898 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.96□□□□□ -0.18
MTHFRP42898 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.96□□□□□ -0.18
MTHFRP42898 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MTHFRP42898 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MTHFRP42898 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
MTHFRP42898 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.95□□□□□ -0.18
MTHFRP42898 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
MTHFRP42898 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.95□□□□□ -0.18
MTHFRP42898 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
MTHFRP42898 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC13.95□□□□□ -0.18
MTHFRP42898 ASLP1-201ENST00000428790 637 ntBASIC13.95□□□□□ -0.18
MTHFRP42898 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC13.95□□□□□ -0.18
MTHFRP42898 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
MTHFRP42898 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MTHFRP42898 AC063924.1-201ENST00000546680 673 ntBASIC13.95□□□□□ -0.18
MTHFRP42898 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC13.95□□□□□ -0.18
MTHFRP42898 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC13.95□□□□□ -0.18
MTHFRP42898 TPST2P1-201ENST00000564073 1102 ntBASIC13.95□□□□□ -0.18
MTHFRP42898 MIR5193-201ENST00000584510 109 ntBASIC13.95□□□□□ -0.18
MTHFRP42898 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
MTHFRP42898 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC13.95□□□□□ -0.18
MTHFRP42898 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
MTHFRP42898 AC010601.2-201ENST00000623060 774 ntBASIC13.95□□□□□ -0.18
MTHFRP42898 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC13.95□□□□□ -0.18
MTHFRP42898 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MTHFRP42898 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MTHFRP42898 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MTHFRP42898 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms