Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC14.27□□□□□ -0.13
O00370 AC104590.1-202ENST00000558368 1921 ntBASIC14.27□□□□□ -0.13
O00370 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 AC135506.1-201ENST00000603877 1799 ntBASIC14.27□□□□□ -0.13
O00370 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.27□□□□□ -0.13
O00370 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
O00370 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
O00370 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
O00370 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC14.26□□□□□ -0.13
O00370 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
O00370 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC14.26□□□□□ -0.13
O00370 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.26□□□□□ -0.13
O00370 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 AP000354.1-201ENST00000396982 456 ntBASIC14.26□□□□□ -0.13
O00370 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.26□□□□□ -0.13
O00370 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
O00370 AP001120.3-201ENST00000585729 489 ntBASIC14.26□□□□□ -0.13
O00370 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.26□□□□□ -0.13
O00370 AC011247.3-201ENST00000603297 438 ntBASIC14.26□□□□□ -0.13
O00370 AP000553.2-201ENST00000609038 441 ntBASIC14.26□□□□□ -0.13
O00370 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 AP001065.2-201ENST00000617205 644 ntBASIC14.26□□□□□ -0.13
O00370 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.26□□□□□ -0.13
O00370 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
O00370 AL132780.4-201ENST00000624870 1135 ntBASIC14.26□□□□□ -0.13
O00370 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
O00370 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.26□□□□□ -0.13
O00370 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
O00370 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
O00370 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
O00370 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
O00370 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
O00370 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 AC008764.8-201ENST00000623966 2717 ntBASIC14.25□□□□□ -0.13
O00370 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC14.25□□□□□ -0.13
O00370 AC092978.1-202ENST00000637590 1327 ntBASIC14.25□□□□□ -0.13
O00370 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
O00370 AL031432.4-201ENST00000641729 2190 ntBASIC14.25□□□□□ -0.13
O00370 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 RNA5SP491-201ENST00000362936 118 ntBASIC14.25□□□□□ -0.13
O00370 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
O00370 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.25□□□□□ -0.13
O00370 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
O00370 AC092810.2-201ENST00000431570 362 ntBASIC14.25□□□□□ -0.13
O00370 RPE-208ENST00000436630 1128 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC14.25□□□□□ -0.13
O00370 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.25□□□□□ -0.13
O00370 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
O00370 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.25□□□□□ -0.13
O00370 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.25□□□□□ -0.13
O00370 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.25□□□□□ -0.13
O00370 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.25□□□□□ -0.13
O00370 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC14.25□□□□□ -0.13
O00370 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.25□□□□□ -0.13
O00370 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.25□□□□□ -0.13
O00370 FAM187B2P-201ENST00000577135 713 ntBASIC14.25□□□□□ -0.13
O00370 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.25□□□□□ -0.13
O00370 AC026304.1-201ENST00000597953 561 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms