Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC008038.1-201ENST00000634247 1314 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AC008764.8-201ENST00000623966 2717 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC021305.1-201ENST00000520656 1514 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC092810.2-201ENST00000431570 362 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC022494.1-201ENST00000466044 728 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC073352.2-201ENST00000609385 439 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AL118506.1-201ENST00000601296 3082 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 AC120024.4-201ENST00000624285 2143 ntBASIC11.78□□□□□ -0.52
NPIPB4C9JG80 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 DLX5-201ENST00000222598 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB4C9JG80 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 CES1P1-201ENST00000421606 1704 ntBASIC11.77□□□□□ -0.52
NPIPB4C9JG80 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 CTAGE10P-201ENST00000318353 2408 ntBASIC11.77□□□□□ -0.52
NPIPB4C9JG80 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NPIPB4C9JG80 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 PMF1-201ENST00000368273 884 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RHOC-205ENST00000369636 786 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RPL35P1-201ENST00000450819 370 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AP003398.1-201ENST00000531124 318 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 RHOQP1-201ENST00000555758 579 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AC105137.3-201ENST00000617588 984 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 MIR6858-201ENST00000620733 67 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 AC026336.4-201ENST00000624565 1050 ntBASIC11.77□□□□□ -0.53
NPIPB4C9JG80 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
NPIPB4C9JG80 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms