Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RN7SL8P-201ENST00000461771 266 ntBASIC14.21□□□□□ -0.13
LMO3Q8TAP4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 ALG1L7P-201ENST00000502317 768 ntBASIC14.21□□□□□ -0.13
LMO3Q8TAP4 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 NSD1-211ENST00000511258 809 ntTSL 3 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 AC091304.3-201ENST00000566500 716 ntBASIC14.21□□□□□ -0.13
LMO3Q8TAP4 CLPP-205ENST00000596605 646 ntTSL 2 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 RN7SL736P-201ENST00000613111 269 ntBASIC14.21□□□□□ -0.13
LMO3Q8TAP4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LMO3Q8TAP4 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LMO3Q8TAP4 SLC9A3P3-201ENST00000457608 2229 ntBASIC14.21□□□□□ -0.14
LMO3Q8TAP4 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 KCTD21-AS1-207ENST00000600795 1549 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 TRIM80P-201ENST00000455685 2848 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 KRT18P4-201ENST00000422599 1288 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ASS1P2-201ENST00000439895 1223 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 C2orf69P1-201ENST00000563532 1093 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 MIR4722-201ENST00000578292 60 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 AC005274.1-201ENST00000623460 802 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 AL132780.4-201ENST00000624870 1135 ntBASIC14.2□□□□□ -0.14
LMO3Q8TAP4 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 PITPNB-201ENST00000320996 2826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.2□□□□□ -0.14
LMO3Q8TAP4 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LMO3Q8TAP4 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms