Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 MIR4522-201ENST00000584932 87 ntBASIC12.72□□□□□ -0.37
SCN2BO60939 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
SCN2BO60939 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC12.72□□□□□ -0.37
SCN2BO60939 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC12.72□□□□□ -0.37
SCN2BO60939 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SCN2BO60939 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.72□□□□□ -0.37
SCN2BO60939 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 AC020907.1-201ENST00000616460 1350 ntBASIC12.71□□□□□ -0.37
SCN2BO60939 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.71□□□□□ -0.37
SCN2BO60939 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.71□□□□□ -0.37
SCN2BO60939 SERF2-204ENST00000402131 586 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC12.71□□□□□ -0.37
SCN2BO60939 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC12.71□□□□□ -0.37
SCN2BO60939 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.71□□□□□ -0.37
SCN2BO60939 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.71□□□□□ -0.37
SCN2BO60939 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 MRPL22P1-201ENST00000505398 616 ntBASIC12.71□□□□□ -0.37
SCN2BO60939 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.71□□□□□ -0.37
SCN2BO60939 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 MIR4525-201ENST00000580000 75 ntBASIC12.71□□□□□ -0.37
SCN2BO60939 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
SCN2BO60939 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.71□□□□□ -0.37
SCN2BO60939 AC244093.1-201ENST00000610837 814 ntBASIC12.71□□□□□ -0.37
SCN2BO60939 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC12.71□□□□□ -0.37
SCN2BO60939 AC006453.1-201ENST00000636037 1257 ntBASIC12.71□□□□□ -0.37
SCN2BO60939 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.71□□□□□ -0.37
SCN2BO60939 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SCN2BO60939 AC120114.4-201ENST00000623731 2194 ntBASIC12.71□□□□□ -0.37
SCN2BO60939 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SCN2BO60939 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
SCN2BO60939 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SCN2BO60939 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.71□□□□□ -0.38
SCN2BO60939 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.71□□□□□ -0.38
SCN2BO60939 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SCN2BO60939 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SCN2BO60939 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SCN2BO60939 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCN2BO60939 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SCN2BO60939 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.7□□□□□ -0.38
SCN2BO60939 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.7□□□□□ -0.38
SCN2BO60939 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCN2BO60939 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC12.7□□□□□ -0.38
SCN2BO60939 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SCN2BO60939 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCN2BO60939 ORMDL2-201ENST00000243045 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCN2BO60939 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SCN2BO60939 KRT18P40-201ENST00000599859 1571 ntBASIC12.7□□□□□ -0.38
SCN2BO60939 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.7□□□□□ -0.38
SCN2BO60939 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SCN2BO60939 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SCN2BO60939 RNVU1-8-201ENST00000364272 125 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms