Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 WDR7-208ENST00000589935 544 ntTSL 4 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC073869.4-201ENST00000620841 800 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC126755.5-201ENST00000622756 267 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PRAME-203ENST00000402697 2057 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AP000354.1-201ENST00000396982 456 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PPIA-208ENST00000489459 907 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 FAM86B3P-203ENST00000523992 854 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AC087045.2-201ENST00000606279 1003 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PPIA-210ENST00000620047 827 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 FAM90A17P-201ENST00000533716 1957 ntBASIC11.79□□□□□ -0.52
NPIPB4C9JG80 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB4C9JG80 AC006480.2-201ENST00000609770 1337 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms