Protein–RNA interactions for Protein: Q9NVR7

TBCCD1, TBCC domain-containing protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBCCD1Q9NVR7 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 TMEM200A-201ENST00000296978 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 ACSM5-201ENST00000331849 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 KRT18P15-201ENST00000458108 1291 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AL512310.5-201ENST00000551999 515 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AL118558.3-201ENST00000607414 1079 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AC092299.1-201ENST00000632679 757 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 LINC02486-201ENST00000604157 3000 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SALL4P6-201ENST00000429385 1691 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 CCT8L1P-201ENST00000465400 1674 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 AC010336.1-201ENST00000539278 4739 ntBASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TBCCD1Q9NVR7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 AC007952.5-201ENST00000572818 1486 ntBASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TBCCD1Q9NVR7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms