Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC010335.3-201ENST00000623767 531 ntBASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 AL590552.1-201ENST00000623164 1770 ntBASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC42BPAQ5VT25 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 RPSAP46-201ENST00000428316 882 ntBASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 LINC01324-202ENST00000497379 838 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 SLC25A5P6-201ENST00000515328 886 ntBASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 HNRNPA1P7-201ENST00000521273 963 ntBASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 MEG8-220ENST00000636052 1369 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 LSS-211ENST00000522411 2523 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 LINC01649-202ENST00000634255 1743 ntTSL 5 BASIC19.35■□□□□ 0.69
CDC42BPAQ5VT25 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 MEOX1-203ENST00000393661 1206 ntTSL 3 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AL132656.1-201ENST00000452173 490 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 PFN1P10-201ENST00000455962 327 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC023078.3-201ENST00000527463 958 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 ZNF7-209ENST00000529819 513 ntTSL 4 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 NT5CP1-201ENST00000554092 509 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 RN7SL238P-201ENST00000613832 290 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 RN7SL106P-201ENST00000618104 290 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC012184.3-201ENST00000562077 1471 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 HMGB3P4-201ENST00000428776 514 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 RBPMSLP-201ENST00000433427 502 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 ABCC6P2-201ENST00000526069 590 ntBASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC42BPAQ5VT25 AC006581.2-201ENST00000631830 455 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms