Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.73□□□□□ -0.37
CLK1P49759 OR8T1P-201ENST00000421347 918 ntBASIC12.73□□□□□ -0.37
CLK1P49759 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.73□□□□□ -0.37
CLK1P49759 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.73□□□□□ -0.37
CLK1P49759 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.73□□□□□ -0.37
CLK1P49759 RN7SL11P-201ENST00000471305 293 ntBASIC12.73□□□□□ -0.37
CLK1P49759 AC008723.1-201ENST00000506922 207 ntBASIC12.73□□□□□ -0.37
CLK1P49759 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.73□□□□□ -0.37
CLK1P49759 AC005740.1-201ENST00000515639 522 ntBASIC12.73□□□□□ -0.37
CLK1P49759 AC024681.1-201ENST00000521917 487 ntBASIC12.73□□□□□ -0.37
CLK1P49759 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 NDUFB10P1-201ENST00000567319 521 ntBASIC12.73□□□□□ -0.37
CLK1P49759 MIR3619-201ENST00000579667 83 ntBASIC12.73□□□□□ -0.37
CLK1P49759 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
CLK1P49759 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.73□□□□□ -0.37
CLK1P49759 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLK1P49759 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.73□□□□□ -0.37
CLK1P49759 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.73□□□□□ -0.37
CLK1P49759 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 FURIN-201ENST00000268171 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CLK1P49759 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
CLK1P49759 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLK1P49759 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.72□□□□□ -0.37
CLK1P49759 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 KRT8P31-201ENST00000504812 1408 ntBASIC12.72□□□□□ -0.37
CLK1P49759 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC12.72□□□□□ -0.37
CLK1P49759 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.72□□□□□ -0.37
CLK1P49759 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.72□□□□□ -0.37
CLK1P49759 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 AC026320.2-201ENST00000434379 478 ntBASIC12.72□□□□□ -0.37
CLK1P49759 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.72□□□□□ -0.37
CLK1P49759 AC005077.2-201ENST00000449786 690 ntBASIC12.72□□□□□ -0.37
CLK1P49759 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.72□□□□□ -0.37
CLK1P49759 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.72□□□□□ -0.37
CLK1P49759 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CLK1P49759 RN7SL455P-201ENST00000580629 282 ntBASIC12.72□□□□□ -0.37
CLK1P49759 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.72□□□□□ -0.37
CLK1P49759 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 HERC2P10-201ENST00000570209 2393 ntBASIC12.72□□□□□ -0.37
CLK1P49759 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.72□□□□□ -0.37
CLK1P49759 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLK1P49759 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.72□□□□□ -0.37
CLK1P49759 NTM-206ENST00000427481 2583 ntTSL 5 BASIC12.72□□□□□ -0.37
CLK1P49759 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.71□□□□□ -0.37
CLK1P49759 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC12.71□□□□□ -0.37
CLK1P49759 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLK1P49759 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLK1P49759 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLK1P49759 AC008132.1-202ENST00000342005 1389 ntBASIC12.71□□□□□ -0.37
CLK1P49759 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.71□□□□□ -0.37
CLK1P49759 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms