Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 FAM90A7P-201ENST00000382628 1395 ntBASIC12.24□□□□□ -0.45
HTR1AP08908 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 PTN-202ENST00000393083 1599 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 FAM90A23P-201ENST00000400136 1395 ntBASIC12.24□□□□□ -0.45
HTR1AP08908 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC12.24□□□□□ -0.45
HTR1AP08908 VDAC1P1-201ENST00000439229 848 ntBASIC12.24□□□□□ -0.45
HTR1AP08908 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.24□□□□□ -0.45
HTR1AP08908 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 AC005740.1-201ENST00000515639 522 ntBASIC12.24□□□□□ -0.45
HTR1AP08908 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.24□□□□□ -0.45
HTR1AP08908 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.24□□□□□ -0.45
HTR1AP08908 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.24□□□□□ -0.45
HTR1AP08908 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 MIR4741-201ENST00000579822 90 ntBASIC12.24□□□□□ -0.45
HTR1AP08908 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 AC007598.3-201ENST00000623077 1678 ntBASIC12.24□□□□□ -0.45
HTR1AP08908 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HTR1AP08908 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR1AP08908 AIF1L-206ENST00000372302 3340 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR1AP08908 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HTR1AP08908 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 BAIAP3-215ENST00000568887 3763 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AC134682.1-201ENST00000569285 3377 ntBASIC12.23□□□□□ -0.45
HTR1AP08908 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 STPG4-201ENST00000294947 1621 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AC004554.1-201ENST00000422830 1468 ntBASIC12.23□□□□□ -0.45
HTR1AP08908 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 CFL1P6-201ENST00000400899 494 ntBASIC12.23□□□□□ -0.45
HTR1AP08908 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
HTR1AP08908 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
HTR1AP08908 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 SPATA13-205ENST00000409126 2111 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR1AP08908 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR1AP08908 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
HTR1AP08908 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms