Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL929302.1-201ENST00000426556 871 ntBASIC16.03■□□□□ 0.16
POLR3DP05423 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 AC025594.1-201ENST00000469533 543 ntBASIC16.03■□□□□ 0.16
POLR3DP05423 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 AP000920.1-201ENST00000531824 344 ntBASIC16.03■□□□□ 0.16
POLR3DP05423 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
POLR3DP05423 KNOP1P1-201ENST00000542108 989 ntBASIC16.03■□□□□ 0.16
POLR3DP05423 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
POLR3DP05423 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC16.03■□□□□ 0.16
POLR3DP05423 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
POLR3DP05423 KRT8P38-201ENST00000441370 1430 ntBASIC16.02■□□□□ 0.16
POLR3DP05423 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.02■□□□□ 0.16
POLR3DP05423 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.02■□□□□ 0.16
POLR3DP05423 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
POLR3DP05423 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.02■□□□□ 0.16
POLR3DP05423 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC16.02■□□□□ 0.16
POLR3DP05423 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.02■□□□□ 0.16
POLR3DP05423 SDCBP2P1-201ENST00000416115 614 ntBASIC16.02■□□□□ 0.16
POLR3DP05423 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.02■□□□□ 0.16
POLR3DP05423 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.02■□□□□ 0.16
POLR3DP05423 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.02■□□□□ 0.16
POLR3DP05423 AL136084.1-201ENST00000449172 318 ntBASIC16.02■□□□□ 0.16
POLR3DP05423 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.02■□□□□ 0.16
POLR3DP05423 SEPHS2P1-201ENST00000511618 1162 ntBASIC16.02■□□□□ 0.16
POLR3DP05423 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.02■□□□□ 0.16
POLR3DP05423 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC16.02■□□□□ 0.16
POLR3DP05423 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
POLR3DP05423 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.02■□□□□ 0.16
POLR3DP05423 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC16.02■□□□□ 0.16
POLR3DP05423 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
POLR3DP05423 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
POLR3DP05423 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
POLR3DP05423 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.02■□□□□ 0.15
POLR3DP05423 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
POLR3DP05423 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.02■□□□□ 0.15
POLR3DP05423 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
POLR3DP05423 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.02■□□□□ 0.15
POLR3DP05423 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
POLR3DP05423 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR3DP05423 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
POLR3DP05423 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
POLR3DP05423 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR3DP05423 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 AC008040.5-201ENST00000599781 1781 ntBASIC16.01■□□□□ 0.15
POLR3DP05423 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 ZNF877P-201ENST00000437614 612 ntBASIC16.01■□□□□ 0.15
POLR3DP05423 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.01■□□□□ 0.15
POLR3DP05423 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 MIR5091-201ENST00000578707 93 ntBASIC16.01■□□□□ 0.15
POLR3DP05423 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 MKRN5P-201ENST00000445263 1467 ntBASIC16.01■□□□□ 0.15
POLR3DP05423 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.01■□□□□ 0.15
POLR3DP05423 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 AC104758.3-203ENST00000562938 2123 ntBASIC16.01■□□□□ 0.15
POLR3DP05423 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 AC012358.2-201ENST00000430010 1434 ntBASIC16.01■□□□□ 0.15
POLR3DP05423 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC16.01■□□□□ 0.15
POLR3DP05423 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
POLR3DP05423 AP000437.1-201ENST00000624057 2085 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms