Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 PISD-203ENST00000397500 2194 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 FAM183BP-201ENST00000409072 1595 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 OR7E155P-201ENST00000412208 1014 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 GALP-202ENST00000440823 889 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 LYPLA2P1-203ENST00000447689 696 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 NALT1-202ENST00000450304 437 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 NDUFB2P1-201ENST00000506966 295 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 HCG18-245ENST00000602550 559 ntTSL 4 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 MIR6842-201ENST00000612539 65 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 COX6A1P2-201ENST00000620597 330 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC018445.4-201ENST00000624066 2291 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 CTBP2P8-201ENST00000422584 1330 ntBASIC11.81□□□□□ -0.52
NPIPB4C9JG80 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NPIPB4C9JG80 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 SERPINI1-202ENST00000446050 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 CCT8-211ENST00000540844 1927 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 BAK1P1-201ENST00000317045 636 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 MIR324-201ENST00000362183 83 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC079112.1-201ENST00000454972 939 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 TBC1D3P6-201ENST00000505954 962 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC093826.1-201ENST00000508655 993 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AP003170.2-201ENST00000544730 786 ntBASIC11.8□□□□□ -0.52
NPIPB4C9JG80 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
NPIPB4C9JG80 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms