Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COMMD3-BMI1R4GMX3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
COMMD3-BMI1R4GMX3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
COMMD3-BMI1R4GMX3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 AC092053.2-201ENST00000640557 1818 ntBASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COMMD3-BMI1R4GMX3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COMMD3-BMI1R4GMX3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
COMMD3-BMI1R4GMX3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COMMD3-BMI1R4GMX3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COMMD3-BMI1R4GMX3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 LINC01521-201ENST00000504184 1943 ntBASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 AL592293.1-201ENST00000502889 1188 ntBASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COMMD3-BMI1R4GMX3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.9
COMMD3-BMI1R4GMX3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
COMMD3-BMI1R4GMX3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
COMMD3-BMI1R4GMX3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
COMMD3-BMI1R4GMX3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.64■□□□□ 0.9
COMMD3-BMI1R4GMX3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms