Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01558Q9Y6Z2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC01558Q9Y6Z2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC01558Q9Y6Z2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC11.58□□□□□ -0.55
LINC01558Q9Y6Z2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.55
LINC01558Q9Y6Z2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 AC139530.1-201ENST00000575312 1977 ntBASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01558Q9Y6Z2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01558Q9Y6Z2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 BX323043.1-201ENST00000641006 1765 ntBASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 FAM99A-202ENST00000538190 1989 ntBASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01558Q9Y6Z2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 WASH5P-204ENST00000632292 975 ntBASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01558Q9Y6Z2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LINC01558Q9Y6Z2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms