Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 AC099791.1-201ENST00000416440 715 ntBASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNFRSF11AQ9Y6Q6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TNFRSF11AQ9Y6Q6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TNFRSF11AQ9Y6Q6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.3■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TNFRSF11AQ9Y6Q6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
TNFRSF11AQ9Y6Q6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC27.29■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CA15P2-201ENST00000611168 834 ntBASIC27.29■■□□□ 1.96
TNFRSF11AQ9Y6Q6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TNFRSF11AQ9Y6Q6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TNFRSF11AQ9Y6Q6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 BX842568.3-201ENST00000418104 571 ntBASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
TNFRSF11AQ9Y6Q6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.26■■□□□ 1.96
TNFRSF11AQ9Y6Q6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
TNFRSF11AQ9Y6Q6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 AC105265.2-201ENST00000467189 838 ntBASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 AC091305.1-201ENST00000479476 895 ntBASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 AC233992.3-201ENST00000607491 485 ntBASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TNFRSF11AQ9Y6Q6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.25■■□□□ 1.95
TNFRSF11AQ9Y6Q6 RASA4CP-201ENST00000424092 1398 ntBASIC27.24■■□□□ 1.95
TNFRSF11AQ9Y6Q6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC27.24■■□□□ 1.95
TNFRSF11AQ9Y6Q6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.24■■□□□ 1.95
TNFRSF11AQ9Y6Q6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TNFRSF11AQ9Y6Q6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 OR2I1P-207ENST00000453522 948 ntBASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 AC027682.1-201ENST00000562846 899 ntBASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
TNFRSF11AQ9Y6Q6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
TNFRSF11AQ9Y6Q6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.21■■□□□ 1.95
TNFRSF11AQ9Y6Q6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms