Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 AL353803.4-201ENST00000565882 1934 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 PBX2P1-201ENST00000493219 1291 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 pRNA.6-201ENST00000610482 90 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 pRNA.5-201ENST00000612139 90 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 pRNA.11-201ENST00000618423 90 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 pRNA.13-201ENST00000619112 90 ntBASIC20.83■□□□□ 0.93
CLCA3PQ9Y6N3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCA3PQ9Y6N3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCA3PQ9Y6N3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CLCA3PQ9Y6N3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 AC135279.3-201ENST00000610945 1311 ntBASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 MIR3181-201ENST00000578512 73 ntBASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.82■□□□□ 0.92
CLCA3PQ9Y6N3 AC092068.2-201ENST00000590491 1708 ntBASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLCA3PQ9Y6N3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 AC024257.2-201ENST00000549699 147 ntBASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 AC011298.3-201ENST00000615796 283 ntBASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 AC106739.1-201ENST00000617035 715 ntBASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CLCA3PQ9Y6N3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLCA3PQ9Y6N3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLCA3PQ9Y6N3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCA3PQ9Y6N3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCA3PQ9Y6N3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCA3PQ9Y6N3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.77■□□□□ 0.92
CLCA3PQ9Y6N3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLCA3PQ9Y6N3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms