Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.32■■□□□ 1
PCDHA9Q9Y5H5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 AC079630.1-202ENST00000618127 1840 ntBASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHA9Q9Y5H5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 UNC93B8-201ENST00000511903 705 ntBASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHA9Q9Y5H5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA9Q9Y5H5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA9Q9Y5H5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 GUSBP5-201ENST00000418136 578 ntBASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA9Q9Y5H5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHA9Q9Y5H5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHA9Q9Y5H5 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
PCDHA9Q9Y5H5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.27■□□□□ 0.99
PCDHA9Q9Y5H5 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA9Q9Y5H5 AC139530.1-201ENST00000575312 1977 ntBASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
PCDHA9Q9Y5H5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHA9Q9Y5H5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms